Publications

'*' indicates equal contribution. Selected publications are shown below. Full list of pulications is seen in Google Scholar.

Journals

Artificial confocal microscopy for deep label-free imaging

X. Chen, M.E. Kandel, S. He, C. Hu, Y. Lee, K. Sullivan, G. Tracy, H. Chung, H. Kong, M.A. Anastasio, G. Popescu

Nature Photonics, Accepted in Oct 2022, impact factor 38.77

White blood cell detection, classification and analysis using phase imaging with computational specificity (PICS)

M. Fanous, S. He, S. Sengupta, K. Tangella, N. Sobh, M.A. Anastasio, G. Popescu

Scientific Reports, 2022, impact factor 4.996

Cell cycle stage classification using phase imaging with computational specificity

Y.R. He*, S. He*, M.E. Kandel*, Y. Lee, C. Hu, N. Sobh, M.A. Anastasio, G. Popescu

ACS Photonetics, 2022, impact factor 7.5

Live-dead assay on unlabeled cells using phase imaging with computational specificity

C. Hu*, S. He*, Y. Lee, Y.R. He, E.M. Kong, H. Li, M.A. Anastasio, G. Popescu

Nature Communications, 2022, impact factor 14.92

Learning-based Cancer Treatment Outcome Prognosis using Multimodal Biomarkers

M. Saad*, S. He*, W. Thorstad, H. Gay, X. Wu, S. Ruan, Y. Zhao, X. Wang, H. Li

A novel systematic approach for cancer treatment prognosis and its applications in oropharyngeal cancer with microRNA biomarkers

S. He, C. Lian, W. Thorstad, H. Gay, Y. Zhao, S. Ruan, X. Wang, H. Li

Bioinformatics, 2021, impact factor 6.9

Deeply-supervised density regression for automatic cell counting in microscopy images

S. He, K. Minn, L. Solnica-Krezel, M.A. Anastasio, H. Li

Medical Image Analysis, 2021, impact factor 13.8

High-resolution transcriptional and morphogenetic profiling of cells from micropatterned human ESC gastruloid cultures

K. Minn, Y.C. Fu, S. He, S.C. George, M.A. Anastasio, S.A. Morris, L. Solnica-Krezel

Elife, 2020, impact factor 8.14

An Adaptive Low-Rank Modeling-based Active Learning Method for Medical Image Annotation

S. He, J. Wu, C. Lian, H.M. Gach, S. Mutic, W. Bosch, J. Michalski H. Li

Accurate and Robust Lesion RECIST Diameter Prediction and Segmentation with Transformers

Y. Tang, N. Zhang, Y. Wang, S. He, M. Han, J. Xiao, R. Lin,

Deep learning-based multi-class COVID-19 classification with x-ray Images

Z. Fan, S. He, S. Ruan, X. Wang, H. Li,

Learning numerical observers using unsupervised domain adaptation

S. He, W. Zhou, H. Li, M.A Anastasio,